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    "## Week 7"
   ]
  },
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   "metadata": {},
   "source": [
    "### Agenda for (02/22/2022)"
   ]
  },
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   "source": [
    "- Lecture\n",
    "- Lab exercises\n",
    "  - Go over last week's exercises\n",
    "  - install and run Prokka\n",
    "  - Use GhostKOALA to reconstruct metabolic pathways\n",
    "- Study guide for the mid-term"
   ]
  },
  {
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   "metadata": {},
   "source": [
    "### Relevant papers to read"
   ]
  },
  {
   "cell_type": "markdown",
   "metadata": {},
   "source": [
    "**Genome streamlining**\n",
    "\n",
    "Giovannoni et al (2005) Science (https://pubmed.ncbi.nlm.nih.gov/16109880/)\n",
    "\n",
    "**Discovery of CPR bacteria**\n",
    "\n",
    "Brown et al (2015) Nature (https://pubmed.ncbi.nlm.nih.gov/26083755/)"
   ]
  }
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